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PROX1 prospero homeobox 1 [ Aptenodytes forsteri (emperor penguin) ]

Gene ID: 103899164, updated on 11-Mar-2024

Summary

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Gene symbol
PROX1
Gene description
prospero homeobox 1
Locus tag
AS27_04691
Gene type
protein coding
RefSeq status
MODEL
Organism
Aptenodytes forsteri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Sphenisciformes; Spheniscidae; Aptenodytes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008795317.1 (938451..977177, complement)

NW_008795317.1Genomic Context describing neighboring genes Neighboring gene SET and MYND domain containing 2 Neighboring gene uncharacterized LOC103899163 Neighboring gene ribosomal protein S6 kinase C1 Neighboring gene angel homolog 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008795317.1 Unplaced Scaffold Reference ASM69914v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prospero homeobox protein 1
Names
Prospero homeobox protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69914v1

Genomic

  1. NW_008795317.1 Reference ASM69914v1

    Range
    938451..977177 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009279581.1 → XP_009277856.1  prospero homeobox protein 1

    See identical proteins and their annotated locations for XP_009277856.1

    UniProtKB/TrEMBL
    A0A087R2Q3
    Conserved Domains (2) summary
    pfam05044
    Location:578 → 729
    HPD; Homeo-prospero domain
    pfam09805
    Location:229 → 278
    Nop25; Nucleolar protein 12 (25kDa)
Nucleotide Protein
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