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CKAP5 cytoskeleton associated protein 5 [ Serinus canaria (Common canary) ]

Gene ID: 103826688, updated on 3-Apr-2024

Summary

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Gene symbol
CKAP5
Gene description
cytoskeleton associated protein 5
See related
EnsemblRapid:ENSSCAG00000003039
Gene type
protein coding
RefSeq status
MODEL
Organism
Serinus canaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Serinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
46
Annotation release Status Assembly Chr Location
RS_2023_02 current serCan2020 (GCF_022539315.1) 5 NC_066319.1 (23618195..23669814)

Chromosome 5 - NC_066319.1Genomic Context describing neighboring genes Neighboring gene centriolar satellite-associated tubulin polyglutamylase complex regulator 1 Neighboring gene LDL receptor related protein 4 Neighboring gene small nucleolar RNA SNORD67 Neighboring gene Rho GTPase activating protein 1 Neighboring gene coagulation factor II, thrombin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066319.1 Chromosome 5 Reference serCan2020 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule plus end polymerase IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule plus-end binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in centrosome duplication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment or maintenance of microtubule cytoskeleton polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in microtubule polymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic spindle organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in kinetochore IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule plus-end IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in spindle pole IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytoskeleton-associated protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539315.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference serCan2020 Primary Assembly

Genomic

  1. NC_066319.1 Reference serCan2020 Primary Assembly

    Range
    23618195..23669814
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030240286.2 → XP_030096146.1  cytoskeleton-associated protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A8C9MHY3, A0A8C9U3A7
    Related
    ENSSCAP00000003676.1, ENSSCAT00000004268.2
    Conserved Domains (1) summary
    PRK14900
    Location:451 → 560
    valS; valyl-tRNA synthetase; Provisional

  2. XM_050974700.1 → XP_050830657.1  cytoskeleton-associated protein 5 isoform X2

  3. XM_050974701.1 → XP_050830658.1  cytoskeleton-associated protein 5 isoform X4

  4. XM_030240287.2 → XP_030096147.1  cytoskeleton-associated protein 5 isoform X3

    UniProtKB/TrEMBL
    A0A8C9MHT3, A0A8C9MHY3
    Related
    ENSSCAP00000003692.1, ENSSCAT00000004292.2
    Conserved Domains (1) summary
    PRK14900
    Location:451 → 560
    valS; valyl-tRNA synthetase; Provisional

  5. XM_050974698.1 → XP_050830655.1  cytoskeleton-associated protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A8C9U3A7

  6. XM_050974699.1 → XP_050830656.1  cytoskeleton-associated protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A8C9U3A7

  7. XM_050974702.1 → XP_050830659.1  cytoskeleton-associated protein 5 isoform X5

Nucleotide Protein
Heading Accession and Version

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