U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

OGG1 8-oxoguanine DNA glycosylase [ Serinus canaria (Common canary) ]

Gene ID: 103817179, updated on 11-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
OGG1
Gene description
8-oxoguanine DNA glycosylase
See related
EnsemblRapid:ENSSCAG00000018292
Gene type
protein coding
RefSeq status
MODEL
Organism
Serinus canaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Serinus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 12
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_02 current serCan2020 (GCF_022539315.1) 12 NC_066326.1 (8998623..9000641, complement)

Chromosome 12 - NC_066326.1Genomic Context describing neighboring genes Neighboring gene transcriptional adaptor 3 Neighboring gene uncharacterized LOC127060087 Neighboring gene calcium/calmodulin dependent protein kinase I Neighboring gene bromodomain and PHD finger containing 1 Neighboring gene copine family member 9

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_066326.1 Chromosome 12 Reference serCan2020 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 8-oxo-7,8-dihydroguanine DNA N-glycosylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in base-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in base-excision repair, AP site formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
N-glycosylase/DNA lyase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_022539315.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference serCan2020 Primary Assembly

Genomic

  1. NC_066326.1 Reference serCan2020 Primary Assembly

    Range
    8998623..9000641 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030228126.2 → XP_030083986.2  N-glycosylase/DNA lyase isoform X3

    Related
    ENSSCAP00000026479.1, ENSSCAT00000032265.1

  2. XM_030228125.2 → XP_030083985.1  N-glycosylase/DNA lyase isoform X2

    Conserved Domains (1) summary
    TIGR00588
    Location:14 → 314
    ogg; 8-oxoguanine DNA-glycosylase (ogg)

  3. XM_030228124.2 → XP_030083984.1  N-glycosylase/DNA lyase isoform X1

    Related
    ENSSCAP00000024437.1, ENSSCAT00000037748.1
    Conserved Domains (1) summary
    TIGR00588
    Location:14 → 326
    ogg; 8-oxoguanine DNA-glycosylase (ogg)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.