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NSMCE2 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase [ Serinus canaria (Common canary) ]

Gene ID: 103816696, updated on 11-Mar-2024

Summary

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Gene symbol
NSMCE2
Gene description
NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase
See related
EnsemblRapid:ENSSCAG00000022156
Gene type
protein coding
RefSeq status
MODEL
Organism
Serinus canaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Serinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_02 current serCan2020 (GCF_022539315.1) 2 NC_066315.1 (140556051..140679131)

Chromosome 2 - NC_066315.1Genomic Context describing neighboring genes Neighboring gene MTSS I-BAR domain containing 1 Neighboring gene squalene epoxidase Neighboring gene WASH complex subunit 5 Neighboring gene tribbles pseudokinase 1 Neighboring gene LRAT domain containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066315.1 Chromosome 2 Reference serCan2020 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SUMO ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein sumoylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Smc5-Smc6 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 SUMO-protein ligase NSE2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539315.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference serCan2020 Primary Assembly

Genomic

  1. NC_066315.1 Reference serCan2020 Primary Assembly

    Range
    140556051..140679131
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030236316.2 → XP_030092176.2  E3 SUMO-protein ligase NSE2 isoform X1

    Related
    ENSSCAP00000031319.1, ENSSCAT00000029577.1

  2. XM_050970256.1 → XP_050826213.1  E3 SUMO-protein ligase NSE2 isoform X2

  3. XM_050970259.1 → XP_050826216.1  E3 SUMO-protein ligase NSE2 isoform X3

    Related
    ENSSCAP00000032870.1, ENSSCAT00000036997.1

  4. XM_050970257.1 → XP_050826214.1  E3 SUMO-protein ligase NSE2 isoform X3

  5. XM_050970258.1 → XP_050826215.1  E3 SUMO-protein ligase NSE2 isoform X3

Nucleotide Protein
Heading Accession and Version

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