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MID2 midline 2 [ Serinus canaria (Common canary) ]

Gene ID: 103816303, updated on 3-Apr-2024

Summary

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Gene symbol
MID2
Gene description
midline 2
See related
EnsemblRapid:ENSSCAG00000015931
Gene type
protein coding
RefSeq status
MODEL
Organism
Serinus canaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Serinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4A
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_02 current serCan2020 (GCF_022539315.1) 4A NC_066318.1 (19052757..19112283, complement)

Chromosome 4A - NC_066318.1Genomic Context describing neighboring genes Neighboring gene NHS like 2 Neighboring gene peptidylprolyl cis/trans isomerase, NIMA-interacting 4 Neighboring gene uncharacterized LOC127059608 Neighboring gene TSC22 domain family member 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066318.1 Chromosome 4A Reference serCan2020 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable E3 ubiquitin-protein ligase MID2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539315.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference serCan2020 Primary Assembly

Genomic

  1. NC_066318.1 Reference serCan2020 Primary Assembly

    Range
    19052757..19112283 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009090249.4 → XP_009088497.2  probable E3 ubiquitin-protein ligase MID2

    UniProtKB/TrEMBL
    A0A8C9UI08
    Related
    ENSSCAP00000022158.2, ENSSCAT00000024697.2
    Conserved Domains (8) summary
    smart00502
    Location:221 → 346
    BBC; B-Box C-terminal domain
    cd00063
    Location:383 → 483
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd13739
    Location:488 → 657
    SPRY_PRY_TRIM1; PRY/SPRY domain of tripartite motif-binding protein 1 (TRIM1) or MID2
    cd00162
    Location:10 → 59
    RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
    pfam18568
    Location:325 → 376
    COS; TRIM C-terminal subgroup One Signature domain
    cd19823
    Location:175 → 214
    Bbox2_MID2_C-I; B-box-type 2 zinc finger found in midline-2 (MID2) and similar proteins
    cd19837
    Location:117 → 169
    Bbox1_MID2_C-I; B-box-type 1 zinc finger found in midline-2 (MID2) and similar proteins
    cl17238
    Location:10 → 62
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

  2. XM_050974393.1 → XP_050830350.1  probable E3 ubiquitin-protein ligase MID2

Nucleotide Protein
Heading Accession and Version

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