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LRRC17 leucine rich repeat containing 17 [ Serinus canaria (Common canary) ]

Gene ID: 103813532, updated on 11-Mar-2024

Summary

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Gene symbol
LRRC17
Gene description
leucine rich repeat containing 17
Gene type
protein coding
RefSeq status
MODEL
Organism
Serinus canaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Serinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1A
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_02 current serCan2020 (GCF_022539315.1) 1A NC_066314.1 (12102521..12117476)

Chromosome 1A - NC_066314.1Genomic Context describing neighboring genes Neighboring gene fibrinogen like 2 Neighboring gene family with sequence similarity 185 member A Neighboring gene F-box and leucine rich repeat protein 13 Neighboring gene armadillo repeat containing 10 Neighboring gene N-acyl phosphatidylethanolamine phospholipase D Neighboring gene peptidase, mitochondrial processing subunit beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066314.1 Chromosome 1A Reference serCan2020 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat-containing protein 17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539315.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference serCan2020 Primary Assembly

Genomic

  1. NC_066314.1 Reference serCan2020 Primary Assembly

    Range
    12102521..12117476
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018910302.3 → XP_018765847.1  leucine-rich repeat-containing protein 17

    UniProtKB/TrEMBL
    A0A8C9MZA8
    Conserved Domains (3) summary
    COG4886
    Location:84 → 329
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:80 → 103
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:267 → 323
    LRR_8; Leucine rich repeat

  2. XM_009086849.4 → XP_009085097.1  leucine-rich repeat-containing protein 17

    See identical proteins and their annotated locations for XP_009085097.1

    UniProtKB/TrEMBL
    A0A8C9MZA8
    Conserved Domains (3) summary
    COG4886
    Location:84 → 329
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:80 → 103
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:267 → 323
    LRR_8; Leucine rich repeat
Nucleotide Protein
Heading Accession and Version

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