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NAGA alpha-N-acetylgalactosaminidase [ Serinus canaria (Common canary) ]

Gene ID: 103813308, updated on 11-Mar-2024

Summary

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Gene symbol
NAGA
Gene description
alpha-N-acetylgalactosaminidase
See related
EnsemblRapid:ENSSCAG00000005897
Gene type
protein coding
RefSeq status
MODEL
Organism
Serinus canaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Serinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1A
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_02 current serCan2020 (GCF_022539315.1) 1A NC_066314.1 (47697015..47702176)

Chromosome 1A - NC_066314.1Genomic Context describing neighboring genes Neighboring gene single-pass membrane protein with aspartate rich tail 1 Neighboring gene PH domain containing endocytic trafficking adaptor 2 Neighboring gene WBP2 N-terminal like Neighboring gene septin 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066314.1 Chromosome 1A Reference serCan2020 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-galactosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycoside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosylceramide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539315.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference serCan2020 Primary Assembly

Genomic

  1. NC_066314.1 Reference serCan2020 Primary Assembly

    Range
    47697015..47702176
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009086558.4 → XP_009084806.2  alpha-N-acetylgalactosaminidase

    UniProtKB/TrEMBL
    A0A8C9MSD1
    Related
    ENSSCAP00000007676.1, ENSSCAT00000008695.2
    Conserved Domains (2) summary
    pfam17450
    Location:314 → 397
    Melibiase_2_C; Alpha galactosidase A C-terminal beta sandwich domain
    cl38930
    Location:27 → 311
    AmyAc_family; Alpha amylase catalytic domain family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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