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ELP1 elongator acetyltransferase complex subunit 1 [ Acanthisitta chloris (rifleman) ]

Gene ID: 103811267, updated on 11-Mar-2024

Summary

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Gene symbol
ELP1
Gene description
elongator acetyltransferase complex subunit 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthisitta chloris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Acanthisittidae; Acanthisitta
Also known as
IKBKAP
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
35
Annotation release Status Assembly Chr Location
100 current ASM69581v1 (GCF_000695815.1) Unplaced Scaffold NW_008656270.1 (14253..45041, complement)

NW_008656270.1Genomic Context describing neighboring genes Neighboring gene aprataxin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008656270.1 Unplaced Scaffold Reference ASM69581v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of elongator holoenzyme complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
elongator complex protein 1
Names
inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthisitta chloris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69581v1

Genomic

  1. NW_008656270.1 Reference ASM69581v1

    Range
    14253..45041 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009084228.1 → XP_009082476.1  elongator complex protein 1

    Conserved Domains (4) summary
    COG0457
    Location:788 → 1051
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    COG5290
    Location:52 → 1226
    COG5290; IkappaB kinase complex, IKAP component [Transcription]
    pfam04762
    Location:13 → 905
    IKI3; IKI3 family
    sd00039
    Location:62 → 97
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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