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SPTLC2 serine palmitoyltransferase long chain base subunit 2 [ Acanthisitta chloris (rifleman) ]

Gene ID: 103809493, updated on 11-Mar-2024

Summary

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Gene symbol
SPTLC2
Gene description
serine palmitoyltransferase long chain base subunit 2
Locus tag
N310_00761
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthisitta chloris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Acanthisittidae; Acanthisitta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM69581v1 (GCF_000695815.1) Unplaced Scaffold NW_008691750.1 (1047..57818)

NW_008691750.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008691750.1 Unplaced Scaffold Reference ASM69581v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine C-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of serine C-palmitoyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine palmitoyltransferase 2
Names
Serine palmitoyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthisitta chloris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69581v1

Genomic

  1. NW_008691750.1 Reference ASM69581v1

    Range
    1047..57818
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009082328.1 → XP_009080576.1  serine palmitoyltransferase 2

    UniProtKB/TrEMBL
    A0A091NEW0
    Conserved Domains (2) summary
    PLN02483
    Location:2 → 477
    PLN02483; serine palmitoyltransferase
    COG0156
    Location:50 → 467
    BioF; 7-keto-8-aminopelargonate synthetase or related enzyme [Coenzyme transport and metabolism]
Nucleotide Protein
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