U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SYF2 SYF2 pre-mRNA splicing factor [ Acanthisitta chloris (rifleman) ]

Gene ID: 103805796, updated on 11-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SYF2
Gene description
SYF2 pre-mRNA splicing factor
Locus tag
N310_03522
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthisitta chloris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Acanthisittidae; Acanthisitta
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SYF2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM69581v1 (GCF_000695815.1) Unplaced Scaffold NW_008682241.1 (5578..8881, complement)

NW_008682241.1Genomic Context describing neighboring genes Neighboring gene arginine and serine rich protein 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_008682241.1 Unplaced Scaffold Reference ASM69581v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of Prp19 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of post-mRNA release spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
pre-mRNA-splicing factor SYF2
Names
Pre-mRNA-splicing factor SYF2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Acanthisitta chloris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69581v1

Genomic

  1. NW_008682241.1 Reference ASM69581v1

    Range
    5578..8881 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009078459.1 → XP_009076707.1  pre-mRNA-splicing factor SYF2

    UniProtKB/TrEMBL
    A0A091N5A1
    Conserved Domains (1) summary
    pfam08231
    Location:50 → 198
    SYF2; SYF2 splicing factor
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.