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LRRK2 leucine rich repeat kinase 2 [ Acanthisitta chloris (rifleman) ]

Gene ID: 103800993, updated on 11-Mar-2024

Summary

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Gene symbol
LRRK2
Gene description
leucine rich repeat kinase 2
Locus tag
N310_04181
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthisitta chloris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Acanthisittidae; Acanthisitta
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
49
Annotation release Status Assembly Chr Location
100 current ASM69581v1 (GCF_000695815.1) Unplaced Scaffold NW_008669668.1 (4691..62746)

NW_008669668.1Genomic Context describing neighboring genes Neighboring gene ERGIC and golgi 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008669668.1 Unplaced Scaffold Reference ASM69581v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat serine/threonine-protein kinase 2
Names
Leucine-rich repeat serine/threonine-protein kinase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthisitta chloris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69581v1

Genomic

  1. NW_008669668.1 Reference ASM69581v1

    Range
    4691..62746
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009073389.1 → XP_009071637.1  leucine-rich repeat serine/threonine-protein kinase 2

    Conserved Domains (8) summary
    smart00220
    Location:1806 → 2050
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    COG4886
    Location:934 → 1201
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    cd00116
    Location:907 → 1161
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    cd14068
    Location:1806 → 2057
    STKc_LRRK2; Catalytic domain of the Serine/Threonine Kinase, Leucine-Rich Repeat Kinase 2
    TIGR00231
    Location:1256 → 1428
    small_GTP; small GTP-binding protein domain
    sd00033
    Location:907 → 934
    LRR_RI; leucine-rich repeat [structural motif]
    pfam16095
    Location:1446 → 1662
    COR; C-terminal of Roc, COR, domain
    cl21455
    Location:1256 → 1429
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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