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NHLRC4 NHL repeat containing 4 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 103796470, updated on 11-Mar-2024

Summary

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Gene symbol
NHLRC4
Gene description
NHL repeat containing 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 12 NC_071453.1 (579616..580674)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 12 NC_048394.1 (601500..602538)

Chromosome 12 - NC_071453.1Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-2-like Neighboring gene calpain 15 Neighboring gene proline rich 35 Neighboring gene phosphatidylinositol glycan anchor biosynthesis class Q Neighboring gene RAB40C, member RAS oncogene family

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: NHL-repeat-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071453.1 Reference mCalJa1.2.pat.X

    Range
    579616..580674
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009008837.4 → XP_009007085.2  LOW QUALITY PROTEIN: NHL-repeat-containing protein 4

    Conserved Domains (2) summary
    cd05819
    Location:8 → 48
    NHL; NHL repeat [structural motif]
    cl18310
    Location:3 → 155
    NHL; NHL repeat unit of beta-propeller proteins
Nucleotide Protein
Heading Accession and Version

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