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KDM6A lysine demethylase 6A [ Merops nubicus (carmine bee-eater) ]

Gene ID: 103776912, updated on 11-Mar-2024

Summary

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Gene symbol
KDM6A
Gene description
lysine demethylase 6A
Locus tag
N331_04649
Gene type
protein coding
RefSeq status
MODEL
Organism
Merops nubicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Coraciiformes; Meropidae; Merops
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current ASM69184v1 (GCF_000691845.1) Unplaced Scaffold NW_008621285.1 (4173..83517)

NW_008621285.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008621285.1 Unplaced Scaffold Reference ASM69184v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone H3K27me2/H3K27me3 demethylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heart development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of MLL3/4 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysine-specific demethylase 6A
Names
Lysine-specific demethylase 6A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Merops nubicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69184v1

Genomic

  1. NW_008621285.1 Reference ASM69184v1

    Range
    4173..83517
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008944442.1 → XP_008942690.1  lysine-specific demethylase 6A

    UniProtKB/TrEMBL
    A0A091R2X8
    Conserved Domains (5) summary
    sd00006
    Location:110 → 137
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:143 → 176
    TPR_1; Tetratricopeptide repeat
    pfam13414
    Location:142 → 203
    TPR_11; TPR repeat
    pfam13424
    Location:30 → 107
    TPR_12; Tetratricopeptide repeat
    pfam13431
    Location:97 → 128
    TPR_17; Tetratricopeptide repeat
Nucleotide Protein
Heading Accession and Version

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