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TANK TRAF family member associated NFKB activator [ Manacus vitellinus (golden-collared manakin) ]

Gene ID: 103766785, updated on 11-Mar-2024

Summary

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Gene symbol
TANK
Gene description
TRAF family member associated NFKB activator
See related
Ensembl:ENSMVIG00005013646
Gene type
protein coding
RefSeq status
MODEL
Organism
Manacus vitellinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Pipridae; Manacus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
103 current ASM171598v3 (GCF_001715985.3) Unplaced Scaffold NW_021939632.1 (10230729..10258299)
101 previous assembly ASM171598v1 (GCF_001715985.1) Unplaced Scaffold NW_017219721.1 (10399216..10427460)

NW_021939632.1Genomic Context describing neighboring genes Neighboring gene integrin subunit beta 6 Neighboring gene RNA binding motif single stranded interacting protein 1 Neighboring gene proteasome 26S subunit, non-ATPase 14 Neighboring gene T-box brain transcription factor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TRAF family member-associated NF-kappa-B activator

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manacus vitellinus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM171598v3

Genomic

  1. NW_021939632.1 Reference ASM171598v3

    Range
    10230729..10258299
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029959858.1 → XP_029815718.1  TRAF family member-associated NF-kappa-B activator

    Conserved Domains (2) summary
    COG1196
    Location:3 → 206
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam12845
    Location:192 → 245
    TBD; TBD domain

  2. XM_029959856.1 → XP_029815716.1  TRAF family member-associated NF-kappa-B activator

    Conserved Domains (2) summary
    COG1196
    Location:3 → 206
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam12845
    Location:192 → 245
    TBD; TBD domain

  3. XM_029959857.1 → XP_029815717.1  TRAF family member-associated NF-kappa-B activator

    Conserved Domains (2) summary
    COG1196
    Location:3 → 206
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam12845
    Location:192 → 245
    TBD; TBD domain
Nucleotide Protein
Heading Accession and Version

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