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VCPIP1 valosin containing protein interacting protein 1 [ Manacus vitellinus (golden-collared manakin) ]

Gene ID: 103765230, updated on 11-Mar-2024

Summary

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Gene symbol
VCPIP1
Gene description
valosin containing protein interacting protein 1
Locus tag
N305_03283
See related
Ensembl:ENSMVIG00005000192
Gene type
protein coding
RefSeq status
MODEL
Organism
Manacus vitellinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Pipridae; Manacus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
103 current ASM171598v3 (GCF_001715985.3) Unplaced Scaffold NW_021939396.1 (34020529..34037132)
101 previous assembly ASM171598v1 (GCF_001715985.1) Unplaced Scaffold NW_017219394.1 (35841006..35857546)

NW_021939396.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108640902 Neighboring gene minichromosome maintenance domain containing 2 Neighboring gene serine/threonine-protein kinase Sgk3 Neighboring gene transfer RNA tyrosine (anticodon GUA) Neighboring gene MYB proto-oncogene like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi reassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum membrane fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein K11-linked deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein K48-linked deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deubiquitinating protein VCIP135
Names
Deubiquitinating protein VCIP135

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manacus vitellinus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM171598v3

Genomic

  1. NW_021939396.1 Reference ASM171598v3

    Range
    34020529..34037132
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018079748.3 → XP_017935237.1  deubiquitinating protein VCIP135

    UniProtKB/TrEMBL
    A0A093QGF6
    Related
    ENSMVIP00005000182.1
Nucleotide Protein
Heading Accession and Version

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