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TSPAN12 tetraspanin 12 [ Manacus vitellinus (golden-collared manakin) ]

Gene ID: 103760139, updated on 11-Mar-2024

Summary

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Gene symbol
TSPAN12
Gene description
tetraspanin 12
Locus tag
N305_10862
See related
Ensembl:ENSMVIG00005001859
Gene type
protein coding
RefSeq status
MODEL
Organism
Manacus vitellinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Pipridae; Manacus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
103 current ASM171598v3 (GCF_001715985.3) Unplaced Scaffold NW_021938999.1 (882619..920042, complement)
101 previous assembly ASM171598v1 (GCF_001715985.1) Unplaced Scaffold NW_017219456.1 (942941..987741, complement)

NW_021938999.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108638832 Neighboring gene potassium voltage-gated channel subfamily D member 2 Neighboring gene inhibitor of growth family member 3 Neighboring gene cadherin like and PC-esterase domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tetraspanin-12
Names
Tetraspanin-12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manacus vitellinus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM171598v3

Genomic

  1. NW_021938999.1 Reference ASM171598v3

    Range
    882619..920042 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018067954.3 → XP_017923443.2  tetraspanin-12

    UniProtKB/TrEMBL
    A0A093SKL9
    Conserved Domains (2) summary
    cd03157
    Location:135 → 237
    TM4SF12_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF12_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
    pfam00335
    Location:37 → 263
    Tetraspannin; Tetraspanin family
Nucleotide Protein
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