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PNPT1 polyribonucleotide nucleotidyltransferase 1 [ Manacus vitellinus (golden-collared manakin) ]

Gene ID: 103758596, updated on 11-Mar-2024

Summary

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Gene symbol
PNPT1
Gene description
polyribonucleotide nucleotidyltransferase 1
See related
Ensembl:ENSMVIG00005007986
Gene type
protein coding
RefSeq status
MODEL
Organism
Manacus vitellinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Pipridae; Manacus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
103 current ASM171598v3 (GCF_001715985.3) Unplaced Scaffold NW_021940526.1 (6087408..6103548)
101 previous assembly ASM171598v1 (GCF_001715985.1) Unplaced Scaffold NW_017220092.1 (6278136..6294245)

NW_021940526.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 85A Neighboring gene uncharacterized LOC115307652 Neighboring gene uncharacterized LOC108640595 Neighboring gene EGF containing fibulin extracellular matrix protein 1 Neighboring gene uncharacterized LOC108640590 Neighboring gene protein phosphatase 4 regulatory subunit 3B Neighboring gene cilia and flagella associated protein 36

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5'-RNA exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables polyribonucleotide nucleotidyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial RNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial mRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polyribonucleotide nucleotidyltransferase 1, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manacus vitellinus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM171598v3

Genomic

  1. NW_021940526.1 Reference ASM171598v3

    Range
    6087408..6103548
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018077581.2 → XP_017933070.1  polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1

  2. XM_018077583.2 → XP_017933072.1  polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X2

    Related
    ENSMVIP00005010998.1

  3. XM_018077584.2 → XP_017933073.1  polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X2

Nucleotide Protein
Heading Accession and Version

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