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LOC103758574 sodium/potassium/calcium exchanger 3 [ Manacus vitellinus (golden-collared manakin) ]

Gene ID: 103758574, updated on 21-Dec-2023

Summary

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Gene symbol
LOC103758574
Gene description
sodium/potassium/calcium exchanger 3
Locus tag
N305_05070
See related
Ensembl:ENSMVIG00005013045
Gene type
protein coding
RefSeq status
MODEL
Organism
Manacus vitellinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Pipridae; Manacus
Also known as
RIN2; SLC24A3
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Genomic context

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Location:
chromosome: Un
Exon count:
27
Annotation release Status Assembly Chr Location
103 current ASM171598v3 (GCF_001715985.3) Unplaced Scaffold NW_021940526.1 (7593104..7759146)
101 previous assembly ASM171598v1 (GCF_001715985.1) Unplaced Scaffold NW_017220092.1 (7877425..7992281)

NW_021940526.1Genomic Context describing neighboring genes Neighboring gene cilia and flagella associated protein 61 Neighboring gene crooked neck pre-mRNA splicing factor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium, potassium:sodium antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras and Rab interactor 2; sodium/potassium/calcium exchanger 3
Names
Ras and Rab interactor 2
solute carrier family 24 member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manacus vitellinus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM171598v3

Genomic

  1. NW_021940526.1 Reference ASM171598v3

    Range
    7593104..7759146
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029961680.1 → XP_029817540.1  sodium/potassium/calcium exchanger 3 isoform X2

    UniProtKB/TrEMBL
    A0A093Q5R8
    Conserved Domains (1) summary
    TIGR00927
    Location:1 → 513
    2A1904; K+-dependent Na+/Ca+ exchanger

  2. XM_018077518.3 → XP_017933007.2  ras and Rab interactor 2 isoform X1

    Related
    ENSMVIP00005018374.1
    Conserved Domains (4) summary
    smart00167
    Location:1116 → 1234
    VPS9; Domain present in VPS9
    cd10394
    Location:557 → 656
    SH2_RIN2; Src homology 2 (SH2) domain found in Ras and Rab interactor 2 (RIN2)-like proteins
    TIGR00927
    Location:1 → 454
    2A1904; K+-dependent Na+/Ca+ exchanger
    cd16131
    Location:1255 → 1345
    RA_Rin2; Ras-associating (RA) domain found in Ras and Rab interactor 2 (Rin2)
Nucleotide Protein
Heading Accession and Version

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