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Osbpl6 oxysterol binding protein like 6 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103751788, updated on 11-Apr-2024

Summary

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Gene symbol
Osbpl6
Gene description
oxysterol binding protein like 6
See related
Ensembl:ENSNGAG00000014527
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See Osbpl6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008357637.1 (8290902..8507852)

NW_008357637.1Genomic Context describing neighboring genes Neighboring gene cytochrome c, testis-specific Neighboring gene profilin-1 pseudogene Neighboring gene RNA binding motif protein 45 Neighboring gene protein activator of interferon induced protein kinase EIF2AK2 Neighboring gene pejvakin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008357637 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cholesterol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in perinuclear endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
oxysterol-binding protein-related protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008357637.1 Reference S.galili_v1.0 Primary Assembly

    Range
    8290902..8507852
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029557255.1 → XP_029413115.1  oxysterol-binding protein-related protein 6 isoform X4

    UniProtKB/TrEMBL
    A0A8C6W746
    Conserved Domains (2) summary
    cd13287
    Location:66 → 188
    PH_ORP3_ORP6_ORP7; Human Oxysterol binding protein related proteins 3, 6, and 7 Pleckstrin homology (PH) domain
    pfam01237
    Location:460 → 808
    Oxysterol_BP; Oxysterol-binding protein

  2. XM_029557253.1 → XP_029413113.1  oxysterol-binding protein-related protein 6 isoform X1

    UniProtKB/TrEMBL
    A0A8C6R854, A0A8C6W746
    Conserved Domains (2) summary
    cd13287
    Location:66 → 188
    PH_ORP3_ORP6_ORP7; Human Oxysterol binding protein related proteins 3, 6, and 7 Pleckstrin homology (PH) domain
    pfam01237
    Location:595 → 943
    Oxysterol_BP; Oxysterol-binding protein

  3. XM_029557252.1 → XP_029413112.1  oxysterol-binding protein-related protein 6 isoform X1

    UniProtKB/TrEMBL
    A0A8C6R854, A0A8C6W746
    Related
    ENSNGAP00000012779.1, ENSNGAT00000018345.1
    Conserved Domains (2) summary
    cd13287
    Location:66 → 188
    PH_ORP3_ORP6_ORP7; Human Oxysterol binding protein related proteins 3, 6, and 7 Pleckstrin homology (PH) domain
    pfam01237
    Location:595 → 943
    Oxysterol_BP; Oxysterol-binding protein

  4. XM_029557254.1 → XP_029413114.1  oxysterol-binding protein-related protein 6 isoform X2

    UniProtKB/TrEMBL
    A0A8C6R3R9, A0A8C6W746
    Related
    ENSNGAP00000012795.1, ENSNGAT00000018360.1
    Conserved Domains (2) summary
    cd13287
    Location:66 → 188
    PH_ORP3_ORP6_ORP7; Human Oxysterol binding protein related proteins 3, 6, and 7 Pleckstrin homology (PH) domain
    pfam01237
    Location:564 → 912
    Oxysterol_BP; Oxysterol-binding protein

  5. XM_008855334.3 → XP_008853556.1  oxysterol-binding protein-related protein 6 isoform X1

    UniProtKB/TrEMBL
    A0A8C6R854, A0A8C6W746
    Related
    ENSNGAP00000012785.1, ENSNGAT00000018351.1
    Conserved Domains (2) summary
    cd13287
    Location:66 → 188
    PH_ORP3_ORP6_ORP7; Human Oxysterol binding protein related proteins 3, 6, and 7 Pleckstrin homology (PH) domain
    pfam01237
    Location:595 → 943
    Oxysterol_BP; Oxysterol-binding protein

  6. XM_017794908.2 → XP_017650397.1  oxysterol-binding protein-related protein 6 isoform X3

    UniProtKB/TrEMBL
    A0A8C6W746
    Conserved Domains (2) summary
    cd13287
    Location:1 → 96
    PH_ORP3_ORP6_ORP7; Human Oxysterol binding protein related proteins 3, 6, and 7 Pleckstrin homology (PH) domain
    pfam01237
    Location:503 → 851
    Oxysterol_BP; Oxysterol-binding protein
Nucleotide Protein
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