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Atp2b2 ATPase plasma membrane Ca2+ transporting 2 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103751438, updated on 11-Mar-2024

Summary

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Gene symbol
Atp2b2
Gene description
ATPase plasma membrane Ca2+ transporting 2
See related
Ensembl:ENSNGAG00000015473
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008357033.1 (4777417..5139003, complement)

NW_008357033.1Genomic Context describing neighboring genes Neighboring gene ghrelin and obestatin prepropeptide Neighboring gene SEC13 homolog, nuclear pore and COPII coat complex component Neighboring gene small nucleolar RNA U13 Neighboring gene 60S ribosomal protein L17 pseudogene Neighboring gene solute carrier family 6 member 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008357033 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables P-type calcium transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables PDZ domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cytosolic calcium ion concentration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plasma membrane calcium-transporting ATPase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008357033.1 Reference S.galili_v1.0 Primary Assembly

    Range
    4777417..5139003 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008854882.2 → XP_008853104.1  plasma membrane calcium-transporting ATPase 2 isoform X1

    See identical proteins and their annotated locations for XP_008853104.1

    UniProtKB/TrEMBL
    A0A8C6R796
    Conserved Domains (2) summary
    TIGR01517
    Location:12 → 1087
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam12424
    Location:1126 → 1172
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal

  2. XM_008854881.3 → XP_008853103.1  plasma membrane calcium-transporting ATPase 2 isoform X1

    See identical proteins and their annotated locations for XP_008853103.1

    UniProtKB/TrEMBL
    A0A8C6R796
    Conserved Domains (2) summary
    TIGR01517
    Location:12 → 1087
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam12424
    Location:1126 → 1172
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal

  3. XM_008854887.1 → XP_008853109.1  plasma membrane calcium-transporting ATPase 2 isoform X6

    UniProtKB/TrEMBL
    A0A8C6R796, A0A8C6R7C3
    Related
    ENSNGAP00000014153.1, ENSNGAT00000019740.1
    Conserved Domains (2) summary
    TIGR01517
    Location:12 → 1042
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam12424
    Location:1081 → 1127
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal

  4. XM_008854884.1 → XP_008853106.1  plasma membrane calcium-transporting ATPase 2 isoform X3

    UniProtKB/TrEMBL
    A0A8C6R796
    Conserved Domains (2) summary
    TIGR01517
    Location:12 → 1056
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam12424
    Location:1095 → 1141
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal

  5. XM_008854883.1 → XP_008853105.1  plasma membrane calcium-transporting ATPase 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C6R796
    Conserved Domains (2) summary
    TIGR01517
    Location:12 → 1067
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam12424
    Location:1106 → 1152
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal

  6. XM_008854879.1 → XP_008853101.1  plasma membrane calcium-transporting ATPase 2 isoform X1

    See identical proteins and their annotated locations for XP_008853101.1

    UniProtKB/TrEMBL
    A0A8C6R796
    Conserved Domains (2) summary
    TIGR01517
    Location:12 → 1087
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam12424
    Location:1126 → 1172
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal

  7. XM_029557032.1 → XP_029412892.1  plasma membrane calcium-transporting ATPase 2 isoform X9

    UniProtKB/TrEMBL
    A0A8C6R796
    Conserved Domains (2) summary
    TIGR01517
    Location:12 → 1087
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam12424
    Location:1126 → 1201
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal

  8. XM_008854889.3 → XP_008853111.1  plasma membrane calcium-transporting ATPase 2 isoform X8

    UniProtKB/TrEMBL
    A0A8C6R796
    Conserved Domains (2) summary
    TIGR01517
    Location:12 → 1042
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam12424
    Location:1081 → 1123
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal

  9. XM_008854888.3 → XP_008853110.1  plasma membrane calcium-transporting ATPase 2 isoform X7

    UniProtKB/TrEMBL
    A0A8C6R796
    Conserved Domains (2) summary
    TIGR01517
    Location:12 → 1056
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam12424
    Location:1095 → 1137
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal

  10. XM_008854885.3 → XP_008853107.1  plasma membrane calcium-transporting ATPase 2 isoform X4

    UniProtKB/TrEMBL
    A0A8C6R796
    Related
    ENSNGAP00000014168.1, ENSNGAT00000019756.1
    Conserved Domains (2) summary
    TIGR01517
    Location:12 → 1087
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam12424
    Location:1126 → 1168
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal

  11. XM_008854886.1 → XP_008853108.1  plasma membrane calcium-transporting ATPase 2 isoform X5

    UniProtKB/TrEMBL
    A0A8C6R796
    Conserved Domains (2) summary
    TIGR01517
    Location:12 → 1087
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam12424
    Location:1126 → 1168
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
Nucleotide Protein
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