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Nr4a3 nuclear receptor subfamily 4 group A member 3 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103749083, updated on 11-Mar-2024

Summary

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Gene symbol
Nr4a3
Gene description
nuclear receptor subfamily 4 group A member 3
See related
Ensembl:ENSNGAG00000023907
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See Nr4a3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008354705.1 (707874..752102)

NW_008354705.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase subunit 7C, mitochondrial Neighboring gene uncharacterized LOC115067496 Neighboring gene syntaxin 17 Neighboring gene endoplasmic reticulum protein 44 Neighboring gene small nucleolar RNA SNORD99

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008354705 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear glucocorticoid receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to corticotropin-releasing hormone stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear receptor subfamily 4 group A member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008354705.1 Reference S.galili_v1.0 Primary Assembly

    Range
    707874..752102
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029555435.1 → XP_029411295.1  nuclear receptor subfamily 4 group A member 3 isoform X2

    Conserved Domains (1) summary
    cd06969
    Location:293 → 367
    NR_DBD_NGFI-B; DNA-binding domain of the orphan nuclear receptor, nerve growth factor-induced-B

  2. XM_008851895.3 → XP_008850117.1  nuclear receptor subfamily 4 group A member 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C6RYY8
    Related
    ENSNGAP00000026187.1, ENSNGAT00000031914.1
    Conserved Domains (2) summary
    cd06969
    Location:293 → 367
    NR_DBD_NGFI-B; DNA-binding domain of the orphan nuclear receptor, nerve growth factor-induced-B
    cl11397
    Location:399 → 629
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators

  3. XM_029555434.1 → XP_029411294.1  nuclear receptor subfamily 4 group A member 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C6RYY8
    Conserved Domains (2) summary
    cd06969
    Location:293 → 367
    NR_DBD_NGFI-B; DNA-binding domain of the orphan nuclear receptor, nerve growth factor-induced-B
    cl11397
    Location:399 → 629
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
Nucleotide Protein
Heading Accession and Version

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