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Jph2 junctophilin 2 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103748377, updated on 11-Mar-2024

Summary

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Gene symbol
Jph2
Gene description
junctophilin 2
See related
Ensembl:ENSNGAG00000010483
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008353921.1 (2845355..2923981, complement)

NW_008353921.1Genomic Context describing neighboring genes Neighboring gene histone H3.3-like Neighboring gene TOX high mobility group box family member 2 Neighboring gene uncharacterized LOC108491688 Neighboring gene oxidative stress responsive serine rich 1 Neighboring gene ganglioside induced differentiation associated protein 1 like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008353921 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of junctional membrane complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
junctophilin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008353921.1 Reference S.galili_v1.0 Primary Assembly

    Range
    2845355..2923981 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008851000.3 → XP_008849222.1  junctophilin-2

    UniProtKB/TrEMBL
    A0A8C6QT34
    Related
    ENSNGAP00000007172.1, ENSNGAT00000012650.1
    Conserved Domains (2) summary
    PLN03185
    Location:4 → 143
    PLN03185; phosphatidylinositol phosphate kinase; Provisional
    PHA03247
    Location:452 → 638
    PHA03247; large tegument protein UL36; Provisional
Nucleotide Protein
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