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Snapc1 small nuclear RNA activating complex polypeptide 1 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103747966, updated on 11-Mar-2024

Summary

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Gene symbol
Snapc1
Gene description
small nuclear RNA activating complex polypeptide 1
See related
Ensembl:ENSNGAG00000005403
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See Snapc1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008353267.1 (2600307..2622039, complement)

NW_008353267.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103747963 Neighboring gene synaptotagmin 16 Neighboring gene myosin regulatory light chain 12B pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene hypoxia inducible factor 1 subunit alpha

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008353267 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in snRNA transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in snRNA transcription by RNA polymerase III IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of snRNA-activating protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
snRNA-activating protein complex subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008353267.1 Reference S.galili_v1.0 Primary Assembly

    Range
    2600307..2622039 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008850504.3 → XP_008848726.1  snRNA-activating protein complex subunit 1

    UniProtKB/TrEMBL
    A0A8C6QJH6
    Related
    ENSNGAP00000004224.1, ENSNGAT00000006663.1
    Conserved Domains (1) summary
    pfam09808
    Location:40 → 224
    SNAPc_SNAP43; Small nuclear RNA activating complex (SNAPc), subunit SNAP43
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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