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Lonrf1 LON peptidase N-terminal domain and ring finger 1 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103744332, updated on 11-Mar-2024

Summary

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Gene symbol
Lonrf1
Gene description
LON peptidase N-terminal domain and ring finger 1
See related
Ensembl:ENSNGAG00000015573
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008348795.1 (708901..745545, complement)

NW_008348795.1Genomic Context describing neighboring genes Neighboring gene claudin 23 Neighboring gene PEAK1 related, kinase-activating pseudokinase 1 Neighboring gene 60S ribosomal protein L37a-like Neighboring gene uncharacterized LOC103744323 Neighboring gene tRNA methyltransferase 9B (putative)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008348795 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LON peptidase N-terminal domain and RING finger protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008348795.1 Reference S.galili_v1.0 Primary Assembly

    Range
    708901..745545 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008846078.2 → XP_008844300.1  LON peptidase N-terminal domain and RING finger protein 1

    UniProtKB/TrEMBL
    A0A8C6R7I3
    Related
    ENSNGAP00000014213.1, ENSNGAT00000019802.1
    Conserved Domains (7) summary
    COG4783
    Location:166 → 263
    YfgC; Putative Zn-dependent protease, contains TPR repeats [General function prediction only]
    COG5574
    Location:373 → 475
    PEX10; RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
    sd00006
    Location:157 → 184
    TPR; TPR repeat [structural motif]
    cd00162
    Location:78 → 113
    RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
    cd16514
    Location:424 → 465
    RING2-HC_LONFs; RING finger 2, HC subclass, found in the LON peptidase N-terminal domain and RING finger proteins family
    pfam02190
    Location:515 → 713
    LON_substr_bdg; ATP-dependent protease La (LON) substrate-binding domain
    cl17238
    Location:78 → 114
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
Nucleotide Protein
Heading Accession and Version

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