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Skap2 src kinase associated phosphoprotein 2 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103740810, updated on 11-Mar-2024

Summary

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Gene symbol
Skap2
Gene description
src kinase associated phosphoprotein 2
See related
Ensembl:ENSNGAG00000016991
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008345290.1 (6456090..6642026, complement)

NW_008345290.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L23a pseudogene Neighboring gene eukaryotic translation initiation factor 4B pseudogene Neighboring gene small nucleolar RNA SNORA8 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008345290 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
src kinase-associated phosphoprotein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008345290.1 Reference S.galili_v1.0 Primary Assembly

    Range
    6456090..6642026 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029567538.1 → XP_029423398.1  src kinase-associated phosphoprotein 2 isoform X2

    Conserved Domains (2) summary
    cd12045
    Location:247 → 299
    SH3_SKAP2; Src Homology 3 domain of Src Kinase-Associated Phosphoprotein 2
    cl17171
    Location:104 → 168
    PH-like; Pleckstrin homology-like domain

  2. XM_008841498.3 → XP_008839720.1  src kinase-associated phosphoprotein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C6W8R1
    Conserved Domains (2) summary
    cd13381
    Location:117 → 222
    PH_Skap-hom_Skap2; Src kinase-associated phosphoprotein homolog and Skap 2 Pleckstrin homology (PH) domain
    cl17036
    Location:301 → 353
    SH3; Src Homology 3 domain superfamily

  3. XM_017800234.2 → XP_017655723.1  src kinase-associated phosphoprotein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C6W8R1
    Related
    ENSNGAP00000016190.1, ENSNGAT00000021804.1
    Conserved Domains (2) summary
    cd13381
    Location:117 → 222
    PH_Skap-hom_Skap2; Src kinase-associated phosphoprotein homolog and Skap 2 Pleckstrin homology (PH) domain
    cl17036
    Location:301 → 353
    SH3; Src Homology 3 domain superfamily
Nucleotide Protein
Heading Accession and Version

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