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Emilin2 elastin microfibril interfacer 2 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103735446, updated on 11-Mar-2024

Summary

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Gene symbol
Emilin2
Gene description
elastin microfibril interfacer 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008339923.1 (1016291..1073463)

NW_008339923.1Genomic Context describing neighboring genes Neighboring gene NDC80 kinetochore complex component Neighboring gene structural maintenance of chromosomes flexible hinge domain containing 1 Neighboring gene lipin 2 Neighboring gene myomesin 1 Neighboring gene complex III assembly factor LYRM7 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008339923 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
EMILIN-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008339923.1 Reference S.galili_v1.0 Primary Assembly

    Range
    1016291..1073463
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008834702.3 → XP_008832924.2  EMILIN-2

    Conserved Domains (5) summary
    pfam01391
    Location:852 → 912
    Collagen; Collagen triple helix repeat (20 copies)
    PRK07764
    Location:783 → 926
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    TIGR02168
    Location:265 → 505
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam07546
    Location:49 → 117
    EMI; EMI domain
    cl23878
    Location:930 → 1068
    C1q; C1q domain
Nucleotide Protein
Heading Accession and Version

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