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Tpgs2 tubulin polyglutamylase complex subunit 2 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103733623, updated on 11-Mar-2024

Summary

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Gene symbol
Tpgs2
Gene description
tubulin polyglutamylase complex subunit 2
See related
Ensembl:ENSNGAG00000019653
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See Tpgs2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008337322.1 (5441904..5480557)

NW_008337322.1Genomic Context describing neighboring genes Neighboring gene CUGBP Elav-like family member 4 Neighboring gene U6 spliceosomal RNA Neighboring gene KIAA1328 ortholog Neighboring gene formin homology 2 domain containing 3 Neighboring gene alpha-enolase pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008337322 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein polyglutamylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tubulin polyglutamylase complex subunit 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008337322.1 Reference S.galili_v1.0 Primary Assembly

    Range
    5441904..5480557
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008832507.3 → XP_008830729.1  tubulin polyglutamylase complex subunit 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C6RJT3
    Related
    ENSNGAP00000020018.1, ENSNGAT00000025683.1
    Conserved Domains (1) summary
    smart00860
    Location:42 → 189
    SMI1_KNR4; SMI1 / KNR4 family

  2. XM_029563288.1 → XP_029419148.1  tubulin polyglutamylase complex subunit 2 isoform X1

    Conserved Domains (1) summary
    smart00860
    Location:2 → 131
    SMI1_KNR4; SMI1 / KNR4 family

  3. XM_029563287.1 → XP_029419147.1  tubulin polyglutamylase complex subunit 2 isoform X1

    Conserved Domains (1) summary
    smart00860
    Location:2 → 131
    SMI1_KNR4; SMI1 / KNR4 family

  4. XM_029563289.1 → XP_029419149.1  tubulin polyglutamylase complex subunit 2 isoform X1

    Conserved Domains (1) summary
    smart00860
    Location:2 → 131
    SMI1_KNR4; SMI1 / KNR4 family

  5. XM_029563285.1 → XP_029419145.1  tubulin polyglutamylase complex subunit 2 isoform X1

    Conserved Domains (1) summary
    smart00860
    Location:2 → 131
    SMI1_KNR4; SMI1 / KNR4 family

  6. XM_008832510.3 → XP_008830732.1  tubulin polyglutamylase complex subunit 2 isoform X1

    See identical proteins and their annotated locations for XP_008830732.1

    Conserved Domains (1) summary
    smart00860
    Location:2 → 131
    SMI1_KNR4; SMI1 / KNR4 family

  7. XM_029563286.1 → XP_029419146.1  tubulin polyglutamylase complex subunit 2 isoform X1

    Conserved Domains (1) summary
    smart00860
    Location:2 → 131
    SMI1_KNR4; SMI1 / KNR4 family

  8. XM_029563290.1 → XP_029419150.1  tubulin polyglutamylase complex subunit 2 isoform X1

    Conserved Domains (1) summary
    smart00860
    Location:2 → 131
    SMI1_KNR4; SMI1 / KNR4 family
Nucleotide Protein
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