U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Wdr54 WD repeat domain 54 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103726998, updated on 11-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Wdr54
Gene description
WD repeat domain 54
See related
Ensembl:ENSNGAG00000006061
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Wdr54 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008360310.1 (3113992..3118180, complement)

NW_008360310.1Genomic Context describing neighboring genes Neighboring gene INO80 complex subunit B Neighboring gene rhotekin Neighboring gene chromosome unknown C2orf81 homolog Neighboring gene dynactin subunit 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_008360310 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
WD repeat-containing protein 54

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008360310.1 Reference S.galili_v1.0 Primary Assembly

    Range
    3113992..3118180 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029559425.1 → XP_029415285.1  WD repeat-containing protein 54 isoform X1

    UniProtKB/TrEMBL
    A0A8C6QKB7
    Conserved Domains (2) summary
    sd00039
    Location:199 → 240
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:161 → 312
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_029559426.1 → XP_029415286.1  WD repeat-containing protein 54 isoform X2

    UniProtKB/TrEMBL
    A0A8C6QKB7
    Conserved Domains (2) summary
    sd00039
    Location:184 → 225
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:146 → 297
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_029559427.1 → XP_029415287.1  WD repeat-containing protein 54 isoform X3

    UniProtKB/TrEMBL
    A0A8C6QKB7
    Related
    ENSNGAP00000004528.1, ENSNGAT00000007383.1
    Conserved Domains (2) summary
    sd00039
    Location:87 → 127
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:144 → 295
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.