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SUSD2 sushi domain containing 2 [ Ursus maritimus (polar bear) ]

Gene ID: 103669277, updated on 11-Mar-2024

Summary

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Gene symbol
SUSD2
Gene description
sushi domain containing 2
See related
Ensembl:ENSUMAG00000001712
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus maritimus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current ASM1731132v1 (GCF_017311325.1) Unplaced Scaffold NW_024425897.1 (896367..908594, complement)
100 previous assembly UrsMar_1.0 (GCF_000687225.1) Unplaced Scaffold NW_007907161.1 (881706..887696, complement)

NW_024425897.1Genomic Context describing neighboring genes Neighboring gene gamma-glutamyltransferase 1 Neighboring gene gamma-glutamyltransferase 5 Neighboring gene calcineurin binding protein 1 Neighboring gene D-dopachrome decarboxylase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sushi domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ursus maritimus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1731132v1 Primary Assembly

Genomic

  1. NW_024425897.1 Reference ASM1731132v1 Primary Assembly

    Range
    896367..908594 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040619395.1 → XP_040475329.1  sushi domain-containing protein 2

    UniProtKB/TrEMBL
    A0A452T2G0, A0A8M1F2Y6
    Conserved Domains (4) summary
    smart00723
    Location:286 → 432
    AMOP; Adhesion-associated domain present in MUC4 and other proteins
    cd00033
    Location:724 → 778
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    cl02508
    Location:29 → 64
    Somatomedin_B; Somatomedin B domain
    cl02516
    Location:446 → 611
    VWD; von Willebrand factor type D domain
Nucleotide Protein
Heading Accession and Version

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