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ZBTB18 zinc finger and BTB domain containing 18 [ Corvus brachyrhynchos (American crow) ]

Gene ID: 103621166, updated on 11-Mar-2024

Summary

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Gene symbol
ZBTB18
Gene description
zinc finger and BTB domain containing 18
Locus tag
N302_08519
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus brachyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM69197v1 (GCF_000691975.1) Unplaced Scaffold NW_008236196.1 (2309049..2315556, complement)

NW_008236196.1Genomic Context describing neighboring genes Neighboring gene adenylosuccinate synthase 2 Neighboring gene uncharacterized LOC108448092 Neighboring gene AKT serine/threonine kinase 3 Neighboring gene SHH signaling and ciliogenesis regulator SDCCAG8 Neighboring gene centrosomal protein 170

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008236196.1 Unplaced Scaffold Reference ASM69197v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 18
Names
Zinc finger and BTB domain-containing protein 18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus brachyrhynchos Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69197v1

Genomic

  1. NW_008236196.1 Reference ASM69197v1

    Range
    2309049..2315556 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008639920.2 → XP_008638142.1  zinc finger and BTB domain-containing protein 18

    See identical proteins and their annotated locations for XP_008638142.1

    Conserved Domains (3) summary
    sd00017
    Location:421 → 441
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18324
    Location:10 → 156
    BTB_POZ_ZBTB18_RP58; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 18 (ZBTB18)
    pfam13465
    Location:434 → 456
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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