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ZFAT zinc finger and AT-hook domain containing [ Corvus brachyrhynchos (American crow) ]

Gene ID: 103619018, updated on 11-Mar-2024

Summary

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Gene symbol
ZFAT
Gene description
zinc finger and AT-hook domain containing
Locus tag
N302_04559
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus brachyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
101 current ASM69197v1 (GCF_000691975.1) Unplaced Scaffold NW_008239050.1 (993250..1063565, complement)

NW_008239050.1Genomic Context describing neighboring genes Neighboring gene N-myc downstream regulated 1 Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 1 Neighboring gene uncharacterized LOC108447857 Neighboring gene uncharacterized LOC108447855

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008239050.1 Unplaced Scaffold Reference ASM69197v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein ZFAT
Names
Zinc finger protein ZFAT

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus brachyrhynchos Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69197v1

Genomic

  1. NW_008239050.1 Reference ASM69197v1

    Range
    993250..1063565 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017739058.1 → XP_017594547.1  zinc finger protein ZFAT isoform X2

    UniProtKB/TrEMBL
    A0A091EW20

  2. XM_008637493.2 → XP_008635715.1  zinc finger protein ZFAT isoform X1

    UniProtKB/TrEMBL
    A0A091EW20
    Conserved Domains (4) summary
    COG5048
    Location:253 → 425
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:259 → 279
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:257 → 279
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:271 → 293
    zf-H2C2_2; Zinc-finger double domain

  3. XM_017739059.1 → XP_017594548.1  zinc finger protein ZFAT isoform X3

    UniProtKB/TrEMBL
    A0A091EW20

  4. XM_017739060.1 → XP_017594549.1  zinc finger protein ZFAT isoform X4

Nucleotide Protein
Heading Accession and Version

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