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RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 [ Corvus brachyrhynchos (American crow) ]

Gene ID: 103618311, updated on 11-Mar-2024

Summary

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Gene symbol
RAP1GDS1
Gene description
Rap1 GTPase-GDP dissociation stimulator 1
Locus tag
N302_15437
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus brachyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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See RAP1GDS1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current ASM69197v1 (GCF_000691975.1) Unplaced Scaffold NW_008238673.1 (194339..253460, complement)

NW_008238673.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4E Neighboring gene uncharacterized LOC108447591 Neighboring gene tetraspanin 5 Neighboring gene uncharacterized LOC108447592 Neighboring gene uncharacterized LOC108447593 Neighboring gene COMM domain containing 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008238673.1 Unplaced Scaffold Reference ASM69197v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rap1 GTPase-GDP dissociation stimulator 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus brachyrhynchos Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69197v1

Genomic

  1. NW_008238673.1 Reference ASM69197v1

    Range
    194339..253460 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017738088.1 → XP_017593577.1  rap1 GTPase-GDP dissociation stimulator 1 isoform X6

    UniProtKB/TrEMBL
    A0A091EU72

  2. XM_017738084.1 → XP_017593573.1  rap1 GTPase-GDP dissociation stimulator 1 isoform X3

    UniProtKB/TrEMBL
    A0A091EU72

  3. XM_017738082.1 → XP_017593571.1  rap1 GTPase-GDP dissociation stimulator 1 isoform X1

    UniProtKB/TrEMBL
    A0A091EU72
    Conserved Domains (3) summary
    smart00185
    Location:289 → 332
    ARM; Armadillo/beta-catenin-like repeats
    sd00043
    Location:34 → 59
    ARM; armadillo repeat [structural motif]
    pfam00514
    Location:29 → 60
    Arm; Armadillo/beta-catenin-like repeat

  4. XM_017738083.1 → XP_017593572.1  rap1 GTPase-GDP dissociation stimulator 1 isoform X2

    UniProtKB/TrEMBL
    A0A091EU72
    Conserved Domains (3) summary
    smart00185
    Location:266 → 309
    ARM; Armadillo/beta-catenin-like repeats
    sd00043
    Location:11 → 36
    ARM; armadillo repeat [structural motif]
    pfam00514
    Location:6 → 37
    Arm; Armadillo/beta-catenin-like repeat

  5. XM_017738086.1 → XP_017593575.1  rap1 GTPase-GDP dissociation stimulator 1 isoform X5

  6. XM_017738085.1 → XP_017593574.1  rap1 GTPase-GDP dissociation stimulator 1 isoform X4

Nucleotide Protein
Heading Accession and Version

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