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LINGO2 leucine rich repeat and Ig domain containing 2 [ Corvus brachyrhynchos (American crow) ]

Gene ID: 103616365, updated on 11-Mar-2024

Summary

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Gene symbol
LINGO2
Gene description
leucine rich repeat and Ig domain containing 2
Locus tag
N302_05675
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus brachyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current ASM69197v1 (GCF_000691975.1) Unplaced Scaffold NW_008238355.1 (433227..760564, complement)

NW_008238355.1Genomic Context describing neighboring genes Neighboring gene C9orf72-SMCR8 complex subunit Neighboring gene uncharacterized LOC108446985 Neighboring gene uncharacterized LOC108446982 Neighboring gene uncharacterized LOC108446980

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008238355.1 Unplaced Scaffold Reference ASM69197v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
Names
Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus brachyrhynchos Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69197v1

Genomic

  1. NW_008238355.1 Reference ASM69197v1

    Range
    433227..760564 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008634520.2 → XP_008632742.1  leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2

    Conserved Domains (8) summary
    smart00013
    Location:27 → 60
    LRRNT; Leucine rich repeat N-terminal domain
    smart00082
    Location:355 → 408
    LRRCT; Leucine rich repeat C-terminal domain
    cd00116
    Location:58 → 302
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    pfam07679
    Location:410 → 500
    I-set; Immunoglobulin I-set domain
    sd00033
    Location:83 → 106
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13306
    Location:146 → 276
    LRR_5; Leucine rich repeats (6 copies)
    pfam13855
    Location:250 → 309
    LRR_8; Leucine rich repeat
    cl11960
    Location:425 → 500
    Ig; Immunoglobulin domain

  2. XM_017735451.1 → XP_017590940.1  leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2

    Conserved Domains (8) summary
    smart00013
    Location:27 → 60
    LRRNT; Leucine rich repeat N-terminal domain
    smart00082
    Location:355 → 408
    LRRCT; Leucine rich repeat C-terminal domain
    cd00116
    Location:58 → 302
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    pfam07679
    Location:410 → 500
    I-set; Immunoglobulin I-set domain
    sd00033
    Location:83 → 106
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13306
    Location:146 → 276
    LRR_5; Leucine rich repeats (6 copies)
    pfam13855
    Location:250 → 309
    LRR_8; Leucine rich repeat
    cl11960
    Location:425 → 500
    Ig; Immunoglobulin domain

RNA

  1. XR_001862341.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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