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TSC22D1 TSC22 domain family member 1 [ Corvus brachyrhynchos (American crow) ]

Gene ID: 103615143, updated on 11-Mar-2024

Summary

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Gene symbol
TSC22D1
Gene description
TSC22 domain family member 1
Locus tag
N302_05055
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus brachyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current ASM69197v1 (GCF_000691975.1) Unplaced Scaffold NW_008238132.1 (5120959..5213311, complement)

NW_008238132.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 122 Neighboring gene laccase domain containing 1 Neighboring gene uncharacterized LOC108446614 Neighboring gene nuclear FMR1 interacting protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008238132.1 Unplaced Scaffold Reference ASM69197v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TSC22 domain family protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus brachyrhynchos Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69197v1

Genomic

  1. NW_008238132.1 Reference ASM69197v1

    Range
    5120959..5213311 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017733594.1 → XP_017589083.1  TSC22 domain family protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A091FA39
    Conserved Domains (3) summary
    PRK10263
    Location:500 → 761
    PRK10263; DNA translocase FtsK; Provisional
    cd21936
    Location:970 → 1017
    ZIP_TSC22D; leucine zipper domain found in the TSC22 domain family of leucine zipper transcription factors
    NF033849
    Location:264 → 387
    ser_rich_anae_1; serine-rich protein

  2. XM_008633159.2 → XP_008631381.1  TSC22 domain family protein 1 isoform X4

    Conserved Domains (1) summary
    cl40461
    Location:41 → 119
    ZIP_TSC22D-like; leucine zipper found in the TSC22 domain leucine zipper transcription factors, c-Myc-binding protein, and similar proteins

  3. XM_008633158.2 → XP_008631380.1  TSC22 domain family protein 1 isoform X3

    See identical proteins and their annotated locations for XP_008631380.1

    Conserved Domains (1) summary
    cl40461
    Location:54 → 132
    ZIP_TSC22D-like; leucine zipper found in the TSC22 domain leucine zipper transcription factors, c-Myc-binding protein, and similar proteins

  4. XM_008633160.2 → XP_008631382.1  TSC22 domain family protein 1 isoform X5

    See identical proteins and their annotated locations for XP_008631382.1

    Conserved Domains (1) summary
    cd21936
    Location:1 → 47
    ZIP_TSC22D; leucine zipper domain found in the TSC22 domain family of leucine zipper transcription factors

  5. XM_017733595.1 → XP_017589084.1  TSC22 domain family protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A091FA39
    Conserved Domains (1) summary
    pfam03154
    Location:506 → 854
    Atrophin-1; Atrophin-1 family

RNA

  1. XR_001861823.1 RNA Sequence

  2. XR_001861822.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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