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ZSCAN22 zinc finger and SCAN domain containing 22 [ Galeopterus variegatus (Sunda flying lemur) ]

Gene ID: 103590073, updated on 11-Mar-2024

Summary

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Gene symbol
ZSCAN22
Gene description
zinc finger and SCAN domain containing 22
Gene type
protein coding
RefSeq status
MODEL
Organism
Galeopterus variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Dermoptera; Cynocephalidae; Galeopterus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current G_variegatus-3.0.2 (GCF_000696425.1) Unplaced Scaffold NW_007726875.1 (78716..114526, complement)

NW_007726875.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 837 Neighboring gene zinc finger protein 497 Neighboring gene alpha-1-B glycoprotein Neighboring gene uncharacterized LOC103590074 Neighboring gene zinc finger protein 8 Neighboring gene proline-rich protein 13 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007726875 unplaced scaffold reference G_variegatus-3.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and SCAN domain-containing protein 22

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Galeopterus variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference G_variegatus-3.0.2 Primary Assembly

Genomic

  1. NW_007726875.1 Reference G_variegatus-3.0.2 Primary Assembly

    Range
    78716..114526 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008572196.1 → XP_008570418.1  zinc finger and SCAN domain-containing protein 22 isoform X4

    Conserved Domains (5) summary
    smart00349
    Location:66 → 126
    KRAB; krueppel associated box
    COG5048
    Location:291 → 734
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:806 → 826
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:66 → 105
    KRAB; KRAB box
    pfam13465
    Location:818 → 843
    zf-H2C2_2; Zinc-finger double domain

  2. XM_008572195.1 → XP_008570417.1  zinc finger and SCAN domain-containing protein 22 isoform X3

    Conserved Domains (4) summary
    COG5048
    Location:263 → 475
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:324 → 344
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam02023
    Location:44 → 132
    SCAN; SCAN domain
    pfam13465
    Location:336 → 361
    zf-H2C2_2; Zinc-finger double domain

  3. XM_008572192.1 → XP_008570414.1  zinc finger and SCAN domain-containing protein 22 isoform X1

    Conserved Domains (6) summary
    smart00349
    Location:35 → 95
    KRAB; krueppel associated box
    COG5048
    Location:260 → 703
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:411 → 431
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:269 → 291
    zf-C2H2; Zinc finger, C2H2 type
    pfam01352
    Location:35 → 74
    KRAB; KRAB box
    pfam13465
    Location:423 → 448
    zf-H2C2_2; Zinc-finger double domain

  4. XM_008572193.1 → XP_008570415.1  zinc finger and SCAN domain-containing protein 22 isoform X2

    Conserved Domains (3) summary
    COG5048
    Location:165 → 608
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:316 → 336
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:328 → 353
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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