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SP5 Sp5 transcription factor [ Galeopterus variegatus (Sunda flying lemur) ]

Gene ID: 103586387, updated on 11-Mar-2024

Summary

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Gene symbol
SP5
Gene description
Sp5 transcription factor
Gene type
protein coding
RefSeq status
MODEL
Organism
Galeopterus variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Dermoptera; Cynocephalidae; Galeopterus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current G_variegatus-3.0.2 (GCF_000696425.1) Unplaced Scaffold NW_007726446.1 (464672..467252)

NW_007726446.1Genomic Context describing neighboring genes Neighboring gene myosin IIIB Neighboring gene transmembrane protein 14C pseudogene Neighboring gene SAFB-like transcription modulator Neighboring gene glutamate rich 2 Neighboring gene glutamate decarboxylase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007726446 unplaced scaffold reference G_variegatus-3.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor Sp5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Galeopterus variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference G_variegatus-3.0.2 Primary Assembly

Genomic

  1. NW_007726446.1 Reference G_variegatus-3.0.2 Primary Assembly

    Range
    464672..467252
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008567648.1 → XP_008565870.1  transcription factor Sp5

    Conserved Domains (4) summary
    COG5048
    Location:314 → 387
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:304 → 323
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:359 → 381
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:345 → 368
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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