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HAPLN1 hyaluronan and proteoglycan link protein 1 [ Equus przewalskii (Przewalski's horse) ]

Gene ID: 103563622, updated on 11-Mar-2024

Summary

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Gene symbol
HAPLN1
Gene description
hyaluronan and proteoglycan link protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus przewalskii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Burgud (GCF_000696695.1) Unplaced Scaffold NW_007673103.1 (846971..924456)

NW_007673103.1Genomic Context describing neighboring genes Neighboring gene EGF like repeats and discoidin domains 3 Neighboring gene uncharacterized LOC103563614 Neighboring gene versican Neighboring gene uncharacterized LOC103563691

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007673103 unplaced scaffold reference Burgud Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hyaluronic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hyaluronan and proteoglycan link protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus przewalskii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Burgud Primary Assembly

Genomic

  1. NW_007673103.1 Reference Burgud Primary Assembly

    Range
    846971..924456
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008539053.1 → XP_008537275.1  hyaluronan and proteoglycan link protein 1

    See identical proteins and their annotated locations for XP_008537275.1

    Conserved Domains (4) summary
    cd05877
    Location:53 → 160
    Ig_LP_like; Immunoglobulin (Ig)-like domain of human cartilage link protein (LP)
    smart00410
    Location:54 → 154
    IG_like; Immunoglobulin like
    cd03518
    Location:159 → 253
    Link_domain_HAPLN_module_1; Link_domain_HAPLN_module_1; this link domain is found in the first link module of proteins similar to the vertebrate HAPLN (hyaluronan/HA and proteoglycan binding link) protein family which includes cartilage link protein. The link domain is a HA-binding ...
    cd03519
    Location:260 → 350
    Link_domain_HAPLN_module_2; Link_domain_HAPLN_module_2; this link domain is found in the second link module of proteins similar to the vertebrate HAPLN (hyaluronan/HA and proteoglycan binding link) protein family which includes cartilage link protein. The link domain is a ...
Nucleotide Protein
Heading Accession and Version

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