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ZNF638 zinc finger protein 638 [ Equus przewalskii (Przewalski's horse) ]

Gene ID: 103561357, updated on 11-Mar-2024

Summary

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Gene symbol
ZNF638
Gene description
zinc finger protein 638
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus przewalskii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
100 current Burgud (GCF_000696695.1) Unplaced Scaffold NW_007675291.1 (29756..108548)

NW_007675291.1Genomic Context describing neighboring genes Neighboring gene ATP synthase F(0) complex subunit C3, mitochondrial pseudogene Neighboring gene uncharacterized LOC103561358 Neighboring gene microtubule-associated proteins 1A/1B light chain 3 beta 2-like Neighboring gene dysferlin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007675291 unplaced scaffold reference Burgud Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA splicing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of RNA splicing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 638

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus przewalskii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Burgud Primary Assembly

Genomic

  1. NW_007675291.1 Reference Burgud Primary Assembly

    Range
    29756..108548
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008535936.1 → XP_008534158.1  zinc finger protein 638 isoform X2

    Conserved Domains (4) summary
    smart00451
    Location:1891 → 1923
    ZnF_U1; U1-like zinc finger
    cd12436
    Location:1008 → 1081
    RRM1_2_MATR3_like; RNA recognition motif 1 and 2 in the matrin 3 family of nuclear proteins
    cd12716
    Location:673 → 748
    RRM1_2_NP220; RNA recognition motif 1 and 2 in vertebrate nuclear protein 220 (NP220)
    cl17169
    Location:902 → 976
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. XM_008535935.1 → XP_008534157.1  zinc finger protein 638 isoform X1

    See identical proteins and their annotated locations for XP_008534157.1

    Conserved Domains (4) summary
    smart00451
    Location:1926 → 1958
    ZnF_U1; U1-like zinc finger
    cd12436
    Location:1008 → 1081
    RRM1_2_MATR3_like; RNA recognition motif 1 and 2 in the matrin 3 family of nuclear proteins
    cd12716
    Location:673 → 748
    RRM1_2_NP220; RNA recognition motif 1 and 2 in vertebrate nuclear protein 220 (NP220)
    cl17169
    Location:902 → 976
    RRM_SF; RNA recognition motif (RRM) superfamily

  3. XM_008535934.1 → XP_008534156.1  zinc finger protein 638 isoform X1

    See identical proteins and their annotated locations for XP_008534156.1

    Conserved Domains (4) summary
    smart00451
    Location:1926 → 1958
    ZnF_U1; U1-like zinc finger
    cd12436
    Location:1008 → 1081
    RRM1_2_MATR3_like; RNA recognition motif 1 and 2 in the matrin 3 family of nuclear proteins
    cd12716
    Location:673 → 748
    RRM1_2_NP220; RNA recognition motif 1 and 2 in vertebrate nuclear protein 220 (NP220)
    cl17169
    Location:902 → 976
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
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