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GINS4 GINS complex subunit 4 [ Calypte anna (Anna's hummingbird) ]

Gene ID: 103535375, updated on 11-Mar-2024

Summary

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Gene symbol
GINS4
Gene description
GINS complex subunit 4
Locus tag
N300_03118
Gene type
protein coding
RefSeq status
MODEL
Organism
Calypte anna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Caprimulgimorphae; Apodiformes; Trochilidae; Calypte
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 22
Exon count:
10
Annotation release Status Assembly Chr Location
101 current bCalAnn1_v1.p (GCF_003957555.1) 22 NC_044267.1 (483402..489870, complement)
100 previous assembly ASM69908v1 (GCF_000699085.1) Unplaced Scaffold NW_007621627.1 (193262..198238, complement)

Chromosome 22 - NC_044267.1Genomic Context describing neighboring genes Neighboring gene NK6 homeobox 3 Neighboring gene glycerol-3-phosphate acyltransferase 4 Neighboring gene protein phosphatase 1 regulatory subunit 3C-B-like Neighboring gene golgin A7 Neighboring gene secreted frizzled related protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in DNA-templated DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in double-strand break repair via break-induced replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of GINS complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA replication complex GINS protein SLD5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Calypte anna Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCalAnn1_v1.p

Genomic

  1. NC_044267.1 Reference bCalAnn1_v1.p

    Range
    483402..489870 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030464118.1 → XP_030319978.1  DNA replication complex GINS protein SLD5 isoform X2

    Conserved Domains (2) summary
    cd11711
    Location:35 → 155
    GINS_A_Sld5; Alpha-helical domain of GINS complex protein Sld5
    pfam16922
    Location:174 → 232
    SLD5_C; DNA replication complex GINS protein SLD5 C-terminus

  2. XM_030464120.1 → XP_030319980.1  DNA replication complex GINS protein SLD5 isoform X3

    Conserved Domains (2) summary
    cd11711
    Location:25 → 145
    GINS_A_Sld5; Alpha-helical domain of GINS complex protein Sld5
    pfam16922
    Location:164 → 222
    SLD5_C; DNA replication complex GINS protein SLD5 C-terminus

  3. XM_030464117.1 → XP_030319977.1  DNA replication complex GINS protein SLD5 isoform X1

    Conserved Domains (2) summary
    cd11711
    Location:40 → 160
    GINS_A_Sld5; Alpha-helical domain of GINS complex protein Sld5
    pfam16922
    Location:179 → 237
    SLD5_C; DNA replication complex GINS protein SLD5 C-terminus

  4. XM_030464119.1 → XP_030319979.1  DNA replication complex GINS protein SLD5 isoform X3

    Conserved Domains (2) summary
    cd11711
    Location:25 → 145
    GINS_A_Sld5; Alpha-helical domain of GINS complex protein Sld5
    pfam16922
    Location:164 → 222
    SLD5_C; DNA replication complex GINS protein SLD5 C-terminus

  5. XM_030464121.1 → XP_030319981.1  DNA replication complex GINS protein SLD5 isoform X3

    Conserved Domains (2) summary
    cd11711
    Location:25 → 145
    GINS_A_Sld5; Alpha-helical domain of GINS complex protein Sld5
    pfam16922
    Location:164 → 222
    SLD5_C; DNA replication complex GINS protein SLD5 C-terminus
Nucleotide Protein
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