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CTSC cathepsin C [ Calypte anna (Anna's hummingbird) ]

Gene ID: 103534565, updated on 11-Mar-2024

Summary

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Gene symbol
CTSC
Gene description
cathepsin C
See related
EnsemblRapid:ENSCAAG00010015453
Gene type
protein coding
RefSeq status
MODEL
Organism
Calypte anna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Caprimulgimorphae; Apodiformes; Trochilidae; Calypte
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
101 current bCalAnn1_v1.p (GCF_003957555.1) 1 NC_044244.1 (189716786..189731223)
100 previous assembly ASM69908v1 (GCF_000699085.1) Unplaced Scaffold NW_007621450.1 (6375250..6401894)

Chromosome 1 - NC_044244.1Genomic Context describing neighboring genes Neighboring gene tyrosinase Neighboring gene glutamate metabotropic receptor 5 Neighboring gene RAB38, member RAS oncogene family Neighboring gene transmembrane protein 135

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis involved in protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dipeptidyl peptidase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Calypte anna Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCalAnn1_v1.p

Genomic

  1. NC_044244.1 Reference bCalAnn1_v1.p

    Range
    189716786..189731223
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030461138.1 → XP_030316998.1  dipeptidyl peptidase 1

    Related
    ENSCAAP00010021251.1, ENSCAAT00010022756.1
    Conserved Domains (2) summary
    cd02621
    Location:229 → 458
    Peptidase_C1A_CathepsinC; Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access. Each subunit of ...
    pfam08773
    Location:24 → 136
    CathepsinC_exc; Cathepsin C exclusion domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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