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LEMD2 LEM domain nuclear envelope protein 2 [ Calypte anna (Anna's hummingbird) ]

Gene ID: 103533660, updated on 11-Mar-2024

Summary

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Gene symbol
LEMD2
Gene description
LEM domain nuclear envelope protein 2
Locus tag
N300_03761
Gene type
protein coding
RefSeq status
MODEL
Organism
Calypte anna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Caprimulgimorphae; Apodiformes; Trochilidae; Calypte
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 26
Exon count:
9
Annotation release Status Assembly Chr Location
101 current bCalAnn1_v1.p (GCF_003957555.1) 26 NC_044271.1 (5668706..5682787)
100 previous assembly ASM69908v1 (GCF_000699085.1) Unplaced Scaffold NW_007621336.1 (2618419..2639019)

Chromosome 26 - NC_044271.1Genomic Context describing neighboring genes Neighboring gene glutamate metabotropic receptor 4 Neighboring gene green-sensitive opsin Neighboring gene inositol hexakisphosphate kinase 3 Neighboring gene ubiquinol-cytochrome-c reductase complex assembly factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear envelope organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LEM domain-containing protein 2
Names
LEM domain containing 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Calypte anna Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCalAnn1_v1.p

Genomic

  1. NC_044271.1 Reference bCalAnn1_v1.p

    Range
    5668706..5682787
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030465523.1 → XP_030321383.1  LEM domain-containing protein 2 isoform X1

    Conserved Domains (2) summary
    cd12941
    Location:4 → 41
    LEM_LEMD2; LEM (Lap2/Emerin/Man1) domain found in LEM domain-containing protein 2 (LEM2)
    pfam09402
    Location:561 → 785
    MSC; Man1-Src1p-C-terminal domain

  2. XM_030465524.1 → XP_030321384.1  LEM domain-containing protein 2 isoform X2

    Conserved Domains (1) summary
    cd12941
    Location:4 → 41
    LEM_LEMD2; LEM (Lap2/Emerin/Man1) domain found in LEM domain-containing protein 2 (LEM2)
Nucleotide Protein
Heading Accession and Version

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