U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

DCAF5 DDB1 and CUL4 associated factor 5 [ Calypte anna (Anna's hummingbird) ]

Gene ID: 103532913, updated on 11-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
DCAF5
Gene description
DDB1 and CUL4 associated factor 5
Locus tag
N300_01964
See related
EnsemblRapid:ENSCAAG00010003475
Gene type
protein coding
RefSeq status
MODEL
Organism
Calypte anna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Caprimulgimorphae; Apodiformes; Trochilidae; Calypte
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 5A
Exon count:
13
Annotation release Status Assembly Chr Location
101 current bCalAnn1_v1.p (GCF_003957555.1) 5A NC_044251.1 (9416160..9496115)
100 previous assembly ASM69908v1 (GCF_000699085.1) Unplaced Scaffold NW_007618617.1 (2450274..2519018)

Chromosome 5A - NC_044251.1Genomic Context describing neighboring genes Neighboring gene polypeptide N-acetylgalactosaminyltransferase 16 Neighboring gene exonuclease 3'-5' domain containing 2 Neighboring gene actinin alpha 1 Neighboring gene serine/arginine-rich splicing factor 5

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul4-RING E3 ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
DDB1- and CUL4-associated factor 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Calypte anna Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCalAnn1_v1.p

Genomic

  1. NC_044251.1 Reference bCalAnn1_v1.p

    Range
    9416160..9496115
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030452383.1 → XP_030308243.1  DDB1- and CUL4-associated factor 5 isoform X2

    UniProtKB/TrEMBL
    A0A091HJX2
    Conserved Domains (2) summary
    sd00039
    Location:27 → 69
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:19 → 331
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_030452385.1 → XP_030308245.1  DDB1- and CUL4-associated factor 5 isoform X3

    UniProtKB/TrEMBL
    A0A091HJX2
    Conserved Domains (2) summary
    sd00039
    Location:22 → 58
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:13 → 317
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_030452384.1 → XP_030308244.1  DDB1- and CUL4-associated factor 5 isoform X3

    UniProtKB/TrEMBL
    A0A091HJX2
    Conserved Domains (2) summary
    sd00039
    Location:22 → 58
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:13 → 317
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  4. XM_030452382.1 → XP_030308242.1  DDB1- and CUL4-associated factor 5 isoform X1

    UniProtKB/TrEMBL
    A0A091HJX2
    Related
    ENSCAAP00010004876.1, ENSCAAT00010005155.1
    Conserved Domains (2) summary
    sd00039
    Location:57 → 98
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:49 → 361
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  5. XM_030452386.1 → XP_030308246.1  DDB1- and CUL4-associated factor 5 isoform X3

    UniProtKB/TrEMBL
    A0A091HJX2
    Conserved Domains (2) summary
    sd00039
    Location:22 → 58
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:13 → 317
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  6. XM_030452388.1 → XP_030308248.1  DDB1- and CUL4-associated factor 5 isoform X3

    UniProtKB/TrEMBL
    A0A091HJX2
    Conserved Domains (2) summary
    sd00039
    Location:22 → 58
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:13 → 317
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  7. XM_030452387.1 → XP_030308247.1  DDB1- and CUL4-associated factor 5 isoform X3

    UniProtKB/TrEMBL
    A0A091HJX2
    Conserved Domains (2) summary
    sd00039
    Location:22 → 58
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:13 → 317
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.