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UBLCP1 ubiquitin like domain containing CTD phosphatase 1 [ Calypte anna (Anna's hummingbird) ]

Gene ID: 103532856, updated on 11-Mar-2024

Summary

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Gene symbol
UBLCP1
Gene description
ubiquitin like domain containing CTD phosphatase 1
Locus tag
N300_12983
See related
EnsemblRapid:ENSCAAG00010011709
Gene type
protein coding
RefSeq status
MODEL
Organism
Calypte anna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Caprimulgimorphae; Apodiformes; Trochilidae; Calypte
Orthologs
human mouse all
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Genomic context

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See UBLCP1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
12
Annotation release Status Assembly Chr Location
101 current bCalAnn1_v1.p (GCF_003957555.1) 13 NC_044259.1 (9814938..9827268, complement)
100 previous assembly ASM69908v1 (GCF_000699085.1) Unplaced Scaffold NW_007621068.1 (665223..675353)

Chromosome 13 - NC_044259.1Genomic Context describing neighboring genes Neighboring gene ovomucoid-like Neighboring gene serine protease inhibitor Kazal-type 6 Neighboring gene uncharacterized LOC115599062 Neighboring gene ring finger protein 145

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin-like domain-containing CTD phosphatase 1
Names
Ubiquitin-like domain-containing CTD phosphatase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Calypte anna Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCalAnn1_v1.p

Genomic

  1. NC_044259.1 Reference bCalAnn1_v1.p

    Range
    9814938..9827268 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030459157.1 → XP_030315017.1  ubiquitin-like domain-containing CTD phosphatase 1

    UniProtKB/TrEMBL
    A0A091IB58
    Conserved Domains (2) summary
    TIGR02245
    Location:117 → 311
    HAD_IIID1; HAD-superfamily subfamily IIID hydrolase, TIGR02245
    cd01813
    Location:3 → 77
    Ubl_UBLCP1; ubiquitin-like (Ubl) domain found in ubiquitin-like domain-containing CTD phosphatase 1 (UBLCP1) and similar proteins

  2. XM_030459158.1 → XP_030315018.1  ubiquitin-like domain-containing CTD phosphatase 1

    UniProtKB/TrEMBL
    A0A091IB58
    Related
    ENSCAAP00010016220.1, ENSCAAT00010017163.1
    Conserved Domains (2) summary
    TIGR02245
    Location:117 → 311
    HAD_IIID1; HAD-superfamily subfamily IIID hydrolase, TIGR02245
    cd01813
    Location:3 → 77
    Ubl_UBLCP1; ubiquitin-like (Ubl) domain found in ubiquitin-like domain-containing CTD phosphatase 1 (UBLCP1) and similar proteins

  3. XM_030459159.1 → XP_030315019.1  ubiquitin-like domain-containing CTD phosphatase 1

    UniProtKB/TrEMBL
    A0A091IB58
    Conserved Domains (2) summary
    TIGR02245
    Location:117 → 311
    HAD_IIID1; HAD-superfamily subfamily IIID hydrolase, TIGR02245
    cd01813
    Location:3 → 77
    Ubl_UBLCP1; ubiquitin-like (Ubl) domain found in ubiquitin-like domain-containing CTD phosphatase 1 (UBLCP1) and similar proteins
Nucleotide Protein
Heading Accession and Version

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