U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RFX7 regulatory factor X7 [ Calypte anna (Anna's hummingbird) ]

Gene ID: 103528540, updated on 11-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
RFX7
Gene description
regulatory factor X7
Locus tag
N300_11943
See related
EnsemblRapid:ENSCAAG00010009637
Gene type
protein coding
RefSeq status
MODEL
Organism
Calypte anna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Caprimulgimorphae; Apodiformes; Trochilidae; Calypte
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 10
Exon count:
10
Annotation release Status Assembly Chr Location
101 current bCalAnn1_v1.p (GCF_003957555.1) 10 NC_044256.1 (4076804..4131515, complement)
100 previous assembly ASM69908v1 (GCF_000699085.1) Unplaced Scaffold NW_007620053.1 (1245775..1270957)

Chromosome 10 - NC_044256.1Genomic Context describing neighboring genes Neighboring gene protogenin Neighboring gene NEDD4 E3 ubiquitin protein ligase Neighboring gene testis expressed 9 Neighboring gene meiosis specific nuclear structural 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
DNA-binding protein RFX7

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Calypte anna Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCalAnn1_v1.p

Genomic

  1. NC_044256.1 Reference bCalAnn1_v1.p

    Range
    4076804..4131515 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030456884.1 → XP_030312744.1  DNA-binding protein RFX7 isoform X2

    UniProtKB/TrEMBL
    A0A091I0J1
    Related
    ENSCAAP00010013283.1, ENSCAAT00010014044.1
    Conserved Domains (2) summary
    PHA03247
    Location:169 → 385
    PHA03247; large tegument protein UL36; Provisional
    pfam02257
    Location:8 → 84
    RFX_DNA_binding; RFX DNA-binding domain

  2. XM_030456883.1 → XP_030312743.1  DNA-binding protein RFX7 isoform X1

    UniProtKB/TrEMBL
    A0A091I0J1
    Conserved Domains (3) summary
    PHA03247
    Location:261 → 477
    PHA03247; large tegument protein UL36; Provisional
    pfam02257
    Location:100 → 176
    RFX_DNA_binding; RFX DNA-binding domain
    pfam18326
    Location:38 → 95
    RFX5_N; RFX5 N-terminal domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.