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SLC27A4 solute carrier family 27 member 4 [ Calypte anna (Anna's hummingbird) ]

Gene ID: 103526371, updated on 11-Apr-2024

Summary

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Gene symbol
SLC27A4
Gene description
solute carrier family 27 member 4
Locus tag
N300_09262
See related
EnsemblRapid:ENSCAAG00010011657
Gene type
protein coding
RefSeq status
MODEL
Organism
Calypte anna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Caprimulgimorphae; Apodiformes; Trochilidae; Calypte
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
13
Annotation release Status Assembly Chr Location
101 current bCalAnn1_v1.p (GCF_003957555.1) 17 NC_044262.1 (4378990..4389814, complement)
100 previous assembly ASM69908v1 (GCF_000699085.1) Unplaced Scaffold NW_007619474.1 (1254519..1260539, complement)

Chromosome 17 - NC_044262.1Genomic Context describing neighboring genes Neighboring gene cerebral endothelial cell adhesion molecule Neighboring gene ubiquitin related modifier 1 Neighboring gene transfer RNA arginine (anticodon UCU) Neighboring gene coenzyme Q4 Neighboring gene TruB pseudouridine synthase family member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables long-chain fatty acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables long-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid import into cell IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in medium-chain fatty acid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to nutrient IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microvillus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: long-chain fatty acid transport protein 4
Names
Long-chain fatty acid transport protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Calypte anna Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCalAnn1_v1.p

Genomic

  1. NC_044262.1 Reference bCalAnn1_v1.p

    Range
    4378990..4389814 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030461521.1 → XP_030317381.1  LOW QUALITY PROTEIN: long-chain fatty acid transport protein 4

    UniProtKB/TrEMBL
    A0A091HSY2
    Related
    ENSCAAP00010016170.1, ENSCAAT00010017112.1
    Conserved Domains (1) summary
    cd05939
    Location:99 → 608
    hsFATP4_like; Fatty acid transport proteins (FATP), including FATP4 and FATP1, and similar proteins
Nucleotide Protein
Heading Accession and Version

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