U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

edc4 enhancer of mRNA decapping 4 [ Poecilia reticulata (guppy) ]

Gene ID: 103481209, updated on 11-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
edc4
Gene description
enhancer of mRNA decapping 4
See related
Ensembl:ENSPREG00000021359
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: LG19
Exon count:
30
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG19 NC_024349.1 (4708135..4739658, complement)

Linkage Group LG19 - NC_024349.1Genomic Context describing neighboring genes Neighboring gene thromboxane A synthase 1 (platelet) Neighboring gene neuritin 1-like a Neighboring gene uncharacterized LOC108167291 Neighboring gene uncharacterized LOC108167290 Neighboring gene nuclear transport factor 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_024349.1 Chromosome LG19 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in deadenylation-independent decapping of nuclear-transcribed mRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
enhancer of mRNA-decapping protein 4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024349.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    4708135..4739658 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008436541.1 → XP_008434763.1  enhancer of mRNA-decapping protein 4

    UniProtKB/TrEMBL
    A0A3P9QC06
    Related
    ENSPREP00000031686.1, ENSPRET00000032045.1
    Conserved Domains (3) summary
    pfam16529
    Location:112 → 438
    Ge1_WD40; WD40 region of Ge1, enhancer of mRNA-decapping protein
    sd00039
    Location:177 → 228
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:169 → 397
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.