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mtm1 myotubularin 1 [ Poecilia reticulata (guppy) ]

Gene ID: 103480148, updated on 11-Mar-2024

Summary

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Gene symbol
mtm1
Gene description
myotubularin 1
See related
Ensembl:ENSPREG00000002855
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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See mtm1 in Genome Data Viewer
Location:
chromosome: LG18
Exon count:
16
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG18 NC_024348.1 (3451630..3468805, complement)

Linkage Group LG18 - NC_024348.1Genomic Context describing neighboring genes Neighboring gene macrophage mannose receptor 1-like Neighboring gene CD99 molecule-like 2 Neighboring gene myotubularin related protein 1a Neighboring gene N-acetyltransferase 16 Neighboring gene acyl-CoA oxidase 3, pristanoyl Neighboring gene zinc finger protein 16 like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024348.1 Chromosome LG18 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrion distribution IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in muscle cell cellular homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myotubularin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024348.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    3451630..3468805 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008434996.2 → XP_008433218.1  myotubularin isoform X2

    UniProtKB/TrEMBL
    A0A3P9N3E4
    Conserved Domains (2) summary
    pfam06602
    Location:187 → 518
    Myotub-related; Myotubularin-like phosphatase domain
    cl17171
    Location:81 → 180
    PH-like; Pleckstrin homology-like domain

  2. XM_008434995.2 → XP_008433217.1  myotubularin isoform X1

    UniProtKB/TrEMBL
    A0A3P9N3E4
    Related
    ENSPREP00000004033.1, ENSPRET00000004091.1
    Conserved Domains (2) summary
    pfam06602
    Location:187 → 518
    Myotub-related; Myotubularin-like phosphatase domain
    cl17171
    Location:81 → 180
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
Heading Accession and Version

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