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dedd1 death effector domain-containing 1 [ Poecilia reticulata (guppy) ]

Gene ID: 103477949, updated on 11-Mar-2024

Summary

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Gene symbol
dedd1
Gene description
death effector domain-containing 1
See related
Ensembl:ENSPREG00000013603
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Also known as
dedd2
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG16
Exon count:
6
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG16 NC_024346.1 (13258195..13272618)

Linkage Group LG16 - NC_024346.1Genomic Context describing neighboring genes Neighboring gene ATPase Na+/K+ transporting subunit alpha 3b Neighboring gene uncharacterized LOC103477951 Neighboring gene uncharacterized LOC108167026 Neighboring gene Rab acceptor 1 (prenylated) Neighboring gene POU class 2 homeobox 2a Neighboring gene uncharacterized LOC103477945

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024346.1 Chromosome LG16 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in extrinsic apoptotic signaling pathway via death domain receptors IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-binding death effector domain-containing protein 2
Names
death effector domain containing 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024346.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    13258195..13272618
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008431327.2 → XP_008429549.1  DNA-binding death effector domain-containing protein 2

    UniProtKB/TrEMBL
    A0A3P9PEA2
    Related
    ENSPREP00000020100.1, ENSPRET00000020312.1
    Conserved Domains (1) summary
    cl14633
    Location:19 → 162
    DD; Death Domain Superfamily of protein-protein interaction domains
Nucleotide Protein
Heading Accession and Version

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