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hcrtr2 hypocretin (orexin) receptor 2 [ Poecilia reticulata (guppy) ]

Gene ID: 103477003, updated on 11-Mar-2024

Summary

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Gene symbol
hcrtr2
Gene description
hypocretin (orexin) receptor 2
See related
Ensembl:ENSPREG00000022219
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG15
Exon count:
7
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG15 NC_024345.1 (18152290..18173845)

Linkage Group LG15 - NC_024345.1Genomic Context describing neighboring genes Neighboring gene muscular LMNA-interacting protein Neighboring gene family with sequence similarity 83 member B Neighboring gene GDNF family receptor alpha like Neighboring gene 3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1 Neighboring gene bone morphogenetic protein 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024345.1 Chromosome LG15 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables orexin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in circadian sleep/wake cycle process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in feeding behavior IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
orexin receptor type 2
Names
hypocretin receptor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024345.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    18152290..18173845
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008429799.2 → XP_008428021.1  orexin receptor type 2 isoform X1

    UniProtKB/TrEMBL
    A0A3P9QGI2
    Related
    ENSPREP00000032773.1, ENSPRET00000033145.1
    Conserved Domains (3) summary
    pfam00001
    Location:69 → 362
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    pfam03827
    Location:391 → 422
    Orexin_rec2; Orexin receptor type 2
    cl21561
    Location:63 → 183
    7tm_4; Olfactory receptor

  2. XM_017308853.1 → XP_017164342.1  orexin receptor type 2 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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