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flot2 flotillin 2 [ Poecilia reticulata (guppy) ]

Gene ID: 103476048, updated on 9-Nov-2023

Summary

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Gene symbol
flot2
Gene description
flotillin 2
See related
Ensembl:ENSPREG00000006964
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
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Genomic context

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Location:
chromosome: LG14
Exon count:
12
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG14 NC_024344.1 (16465856..16483770, complement)

Linkage Group LG14 - NC_024344.1Genomic Context describing neighboring genes Neighboring gene Era-like 12S mitochondrial rRNA chaperone 1 Neighboring gene uncharacterized LOC103476046 Neighboring gene sodium- and chloride-dependent GABA transporter ine-like Neighboring gene dehydrogenase/reductase 11a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024344.1 Chromosome LG14 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of myoblast differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
flotillin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024344.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    16465856..16483770 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008428086.2 → XP_008426308.1  flotillin-2 isoform X2

    UniProtKB/TrEMBL
    A0A3P9NL23
    Conserved Domains (4) summary
    smart00244
    Location:87 → 268
    PHB; prohibitin homologues
    cd03399
    Location:34 → 178
    SPFH_flotillin; Flotillin or reggie family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
    pfam15975
    Location:312 → 388
    Flot; Flotillin
    cl19107
    Location:223 → 350
    SPFH_like; core domain of the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily

  2. XM_008428085.2 → XP_008426307.1  flotillin-2 isoform X1

    UniProtKB/TrEMBL
    A0A3P9NL23
    Related
    ENSPREP00000010234.1, ENSPRET00000010351.1
    Conserved Domains (4) summary
    smart00244
    Location:87 → 268
    PHB; prohibitin homologues
    cd03399
    Location:34 → 178
    SPFH_flotillin; Flotillin or reggie family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
    pfam15975
    Location:312 → 388
    Flot; Flotillin
    cl19107
    Location:223 → 350
    SPFH_like; core domain of the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily

  3. XM_008428087.2 → XP_008426309.1  flotillin-2 isoform X3

    Conserved Domains (4) summary
    smart00244
    Location:10 → 191
    PHB; prohibitin homologues
    cd03399
    Location:1 → 101
    SPFH_flotillin; Flotillin or reggie family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
    pfam15975
    Location:235 → 311
    Flot; Flotillin
    cl19107
    Location:146 → 273
    SPFH_like; core domain of the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
Nucleotide Protein
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